Browse entries in the PDBbind-CN Database

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Related entries of code: 1u2y
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1u33RCSB PDB    PDBbind496aa, >1U33_1|Chain... at 100%
1xd0RCSB PDB    PDBbind496aa, >1XD0_1|Chain... at 100%
3oldRCSB PDB    PDBbind496aa, >3OLD_1|Chain... at 99%
3oleRCSB PDB    PDBbind496aa, >3OLE_1|Chain... at 99%
3olgRCSB PDB    PDBbind496aa, >3OLG_1|Chain... at 99%
3oliRCSB PDB    PDBbind496aa, >3OLI_1|Chain... at 99%
4gqqRCSB PDB    PDBbind496aa, >4GQQ_1|Chain... at 100%
4gqrRCSB PDB    PDBbind496aa, >4GQR_1|Chain... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
1e6sRCSB PDB    PDBbindGOX
1e72RCSB PDB    PDBbindGOX
1uwuRCSB PDB    PDBbindGOX
2j78RCSB PDB    PDBbindGOX
3d51RCSB PDB    PDBbindGOX

Entry Information
PDB ID1u2y
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein Namealpha-amylase
Ligand NameGOX
EC.Number E.C.3.2.1.1
Resolution 1.95(Å)
Affinity (Kd/Ki/IC50)Ki=18mM
Release Year2004
Protein/NA SequenceCheck fasta file
Primary Reference J.Biol.Chem. v279 pp. 48282-91, 2004
Ligand Properties
Formula C6H12N2O5
Molecular Weight 192.170
Exact Mass 192.075
No. of atoms 25
No. of bonds 25
Polar Surface Area 125.54
LOGP Value -1.80      (Computed with XLOGP3)
-2.85      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 6
No. of Hydrogen Bond Acceptors: 5
No. of Rotatable Bonds: 6
No. of Nitrogen and Oxygen Atoms: 7
No. of Rings: 1
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P04746  
Entrez Gene IDNCBI Entrez Gene ID: 279  
ASDInformation of known allosteric effects of PDB entries

 
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