Browse entries in the PDBbind-CN Database

Display Options: Structure:  




Goto PDB code:

3D presentation of molecule is powered by 3Dmol, which supports all modern browsers and mobile devices via WebGL.

           
Hold mouse button: left to rotate,middle to shift,right to zoom

Related entries of code: 4b2i
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
4b2lRCSB PDB    PDBbind231aa, >4B2L_1|Chain... at 100%
4b32RCSB PDB    PDBbind231aa, >4B32_1|Chain... at 100%
4b33RCSB PDB    PDBbind231aa, >4B33_1|Chain... at 100%
4b34RCSB PDB    PDBbind231aa, >4B34_1|Chain... at 100%
4b35RCSB PDB    PDBbind231aa, >4B35_1|Chain... at 100%
4b3bRCSB PDB    PDBbind231aa, >4B3B_1|Chain... at 100%
4b3cRCSB PDB    PDBbind231aa, >4B3C_1|Chain... at 100%
4b3dRCSB PDB    PDBbind231aa, >4B3D_1|Chains... at 100%
5fotRCSB PDB    PDBbind231aa, >5FOT_1|Chain... at 100%
5fouRCSB PDB    PDBbind231aa, >5FOU_1|Chain... at 100%
5fovRCSB PDB    PDBbind231aa, >5FOV_1|Chains... at 100%
5fowRCSB PDB    PDBbind231aa, >5FOW_1|Chains... at 100%
5foxRCSB PDB    PDBbind231aa, >5FOX_1|Chain... at 100%
5fpkRCSB PDB    PDBbind231aa, >5FPK_1|Chain... at 98%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
2vtaRCSB PDB    PDBbindLZ1

Entry Information
PDB ID4b2i
Complex TypeProtein-Ligand
PDBbind Subsetrefined set
Protein NameDNA REPAIR AND RECOMBINATION PROTEIN RADA
Ligand NameLZ1
EC.Number E.C.-.-.-.-
Resolution 1.3(Å)
Affinity (Kd/Ki/IC50)Kd=1.0mM
Release Year2013
Protein/NA SequenceCheck fasta file
Primary Reference (2013) Chembiochem Vol. 14: pp. 332
Ligand Properties
Formula C7H6N2
Molecular Weight 118.136
Exact Mass 118.053
No. of atoms 15
No. of bonds 16
Polar Surface Area 28.68
LOGP Value 1.55      (Computed with XLOGP3)
1.56      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 1
No. of Rotatable Bonds: 0
No. of Nitrogen and Oxygen Atoms: 2
No. of Rings: 2
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): O74036  
Entrez Gene IDNCBI Entrez Gene ID: 41713747  
ASDInformation of known allosteric effects of PDB entries

 
This site has been visited times since Nov 2007.


Copyright ©2007-2024    涓婃捣鐩堣禌鎬濅俊鎭鎶鏈夐檺鍏徃    缃戠珯澶囨鍙凤細娌狪CP澶2021015625鍙-3    娌叕缃戝畨澶囷細姝e湪鐢宠涓


Technical Support锛堟妧鏈敮鎸侊級: yingsaisi@foxmail.com