Browse entries in the PDBbind-CN Database

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Related entries of code: 5gmm
Entries with 90% protein sequence similarity cutoff in PDBbind
PDB CodeCheck DatabaseProtein Sequence Similarity
1azmRCSB PDB    PDBbind260aa, >1AZM_1|Chain... at 100%
2foyRCSB PDB    PDBbind260aa, >2FOY_1|Chains... at 100%
2it4RCSB PDB    PDBbind256aa, >2IT4_1|Chains... at 100%
2nmxRCSB PDB    PDBbind260aa, >2NMX_1|Chains... at 100%
2nn1RCSB PDB    PDBbind260aa, >2NN1_1|Chains... at 100%
2nn7RCSB PDB    PDBbind260aa, >2NN7_1|Chains... at 100%
3lxeRCSB PDB    PDBbind260aa, >3LXE_1|Chains... at 100%
4wr7RCSB PDB    PDBbind260aa, >4WR7_1|Chains... at 99%
4wupRCSB PDB    PDBbind260aa, >4WUP_1|Chains... at 99%
5e2mRCSB PDB    PDBbind260aa, >5E2M_1|Chains... at 99%
6evrRCSB PDB    PDBbind261aa, >6EVR_1|Chains... at 100%
6ex1RCSB PDB    PDBbind261aa, >6EX1_1|Chains... at 100%
6f3bRCSB PDB    PDBbind261aa, >6F3B_1|Chains... at 100%
6fafRCSB PDB    PDBbind261aa, >6FAF_1|Chains... at 100%
6g3vRCSB PDB    PDBbind261aa, >6G3V_1|Chains... at 100%
6hwzRCSB PDB    PDBbind261aa, >6HWZ_1|Chains... at 100%
6fagRCSB PDB    PDBbind261aa, >6FAG_1|Chains... at 100%
Complexes with the same small molecule ligand
PDB CodeCheck DatabaseLigand Name
5gmnRCSB PDB    PDBbind949

Entry Information
PDB ID5gmm
Complex TypeProtein-Ligand
PDBbind Subsetgeneral set
Protein NameCarbonic anhydrase 1
Ligand Name949
EC.Number E.C.-.-.-.-
Resolution 2(Å)
Affinity (Kd/Ki/IC50)Kd=29.1uM
Release Year2017
Protein/NA SequenceCheck fasta file
Primary Reference (2016) Biochem. Biophys. Res. Commun. Vol. 478: pp. 1-6
Ligand Properties
Formula C18H16FNO4S
Molecular Weight 361.387
Exact Mass 361.078
No. of atoms 41
No. of bonds 43
Polar Surface Area 94.84
LOGP Value 2.58      (Computed with XLOGP3)
4.50      (Computed with Open Babel)
Drug likeness No. of Hydrogen Bond Donors: 1
No. of Hydrogen Bond Acceptors: 3
No. of Rotatable Bonds: 3
No. of Nitrogen and Oxygen Atoms: 5
No. of Rings: 3
Canonical SMILES
InChI String

Links to External Databases
RCSB PDBThe mother database
PDBsumEnhanced annotations on PDB entries
PubchemComprehensive collection of chemical and biological data
UniProtKB ACUniProt accession number (AC): P00915  
Entrez Gene IDNCBI Entrez Gene ID: 759  
ASDInformation of known allosteric effects of PDB entries

 
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